Your challenge will be to get a decent seal without the plastic retainer going around the window. That looks pretty beat up.
I couldn't find a solution for my window trim ring, which was broken in three of the four corners, and I had a window shot try to glue a couple of seals in there to no avail. they start shrinking up pretty quickly and nothing will hold them.
it's another $600 or so but I'd recommend pulling the window and replacing it, which will give you a good seal and make it much easier to clean up properly too. If they do get you a window make sure they get the right one for your car.
Also make sure the shop knows what the hell they are doing. Let them know you expect the window to be centered properly or they're going to be taking it back out. There's a factory jig to space the window properly which no one uses, and not everyone centers the window properly. The problem with this is you could have a seal lip that pops in under the lip for the window, allowing water to go in the gap where you're trying to keep the water out.
dave
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